DNA Binding Motif

Accessions: MA0001.1 (JASPAR 2018)
Names: AGL3
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2018 1
1 [Pubmed]
Notes: SELEX
Length: 10
Consensus: CCAwWwaTrG
Weblogo:
PSSM: P0 A C G T
01 0 94 1 2 C
02 3 75 0 19 C
03 79 4 3 11 A
04 40 3 4 50 w
05 66 1 1 29 W
06 48 2 0 47 w
07 65 5 5 22 a
08 11 2 3 81 T
09 65 3 28 1 r
10 0 3 88 6 G
Binding TFs: P29383 (SRF-type transcription factor (DNA-binding and dimerisation domain), K-box region)
Binding Sites: MA0001.1.1
MA0001.1.10
MA0001.1.11
MA0001.1.12
MA0001.1.13
MA0001.1.14
MA0001.1.15
MA0001.1.16
MA0001.1.17
MA0001.1.18
MA0001.1.19
MA0001.1.2
MA0001.1.20
MA0001.1.3
MA0001.1.4
MA0001.1.5
MA0001.1.6
MA0001.1.7
MA0001.1.8
MA0001.1.9
Publications: Huang H., Tudor M., Weiss C. A., Hu Y., Ma H. The Arabidopsis MADS-box gene AGL3 is widely expressed and encodes a sequence-specific DNA-binding protein. Plant Mol. Biol. 28:549-567 (1995). [Pubmed]

Disclaimer

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research.