DNA Binding Motif

Accessions: dl-A (DrosophilaTF 1.1)
Names: dl-A
Organisms: Drosophila melanogaster
Libraries: DrosophilaTF 1.1 1
1 Down T.A, Bergman C.M, Su J, Hubbard T.J. Large-scale discovery of promoter motifs in Drosophila melanogaster. PLoS computational biology 3:e7 (2007). [Pubmed]
Length: 11
Consensus: GGGTTTTTCCs
Weblogo:
PSSM: P0 A C G T
01 0 0.0909 0.8182 0.0909 G
02 0 0 1 0 G
03 0 0 1 0 G
04 0.1818 0.0909 0 0.7273 T
05 0.1818 0.0455 0 0.7727 T
06 0.0769 0 0 0.9231 T
07 0 0 0 1 T
08 0 0 0 1 T
09 0.0455 0.9545 0 0 C
10 0 1 0 0 C
11 0.2273 0.3636 0.3182 0.0909 s
Binding TFs: dl-A (Rel homology domain (RHD))
Publications: Pan D., Courey A. J. The same dorsal binding site mediates both activation and repression in a context-dependent manner. EMBO J. 11:1837-1842 (1992). [Pubmed]

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