DNA Binding Motif

						

			
Accessions: 1b01_B (3D-footprint 2022-04-03)

			
Names: TRANSCRIPTIONAL REPRESSOR COPG
Organisms: Streptococcus agalactiae
Libraries: 3D-footprint 2022-04-03 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: TRANSCRIPTIONAL REPRESSOR COPG/DNA COMPLEX
Length: 7
Consensus: GTGCACG
Weblogo: 
PSSM: P0      A      C      G      T
01      6      6     76      8      G
02      0      1      6     89      T
03      6      6     76      8      G
04      6     78      6      6      C
05     76      6      8      6      A
06      0     90      6      0      C
07      0      0     96      0      G
Binding TFs: 1b01_B (Ribbon-helix-helix protein, copG family)
Binding Sites: 1b01_E
1b01_F
			
Publications: Gomis-Rüth F.X, Solá M, Acebo P, Párraga A, Guasch A, Eritja R, González A, Espinosa M, del Solar G, Coll M. The structure of plasmid-encoded transcriptional repressor CopG unliganded and bound to its operator. The EMBO journal 17:7404-15 (1998). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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