DNA Binding Motif

Accessions: 1b01_B (3D-footprint 2022-04-03)
Names: TRANSCRIPTIONAL REPRESSOR COPG
Organisms: Streptococcus agalactiae
Libraries: 3D-footprint 2022-04-03 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: TRANSCRIPTIONAL REPRESSOR COPG/DNA COMPLEX
Length: 7
Consensus: GTGCACG
Weblogo:
PSSM: P0 A C G T
01 6 6 76 8 G
02 0 1 6 89 T
03 6 6 76 8 G
04 6 78 6 6 C
05 76 6 8 6 A
06 0 90 6 0 C
07 0 0 96 0 G
Binding TFs: 1b01_B (Ribbon-helix-helix protein, copG family)
Binding Sites: 1b01_E
1b01_F
Publications: Gomis-Rüth F.X, Solá M, Acebo P, Párraga A, Guasch A, Eritja R, González A, Espinosa M, del Solar G, Coll M. The structure of plasmid-encoded transcriptional repressor CopG unliganded and bound to its operator. The EMBO journal 17:7404-15 (1998). [Pubmed]

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