DNA Binding Motif

Accessions: 3q3d_A (3D-footprint 2022-04-03)
Names: Multidrug-efflux transporter 1 regulator
Organisms: Bacillus subtilis, strain 168
Libraries: 3D-footprint 2022-04-03 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal structure of BmrR bound to puromycin
Length: 4
Consensus: CCCT
Weblogo:
PSSM: P0 A C G T
01 11 67 9 9 C
02 9 67 11 9 C
03 9 67 9 11 C
04 0 0 0 96 T
Binding TFs: 3q3d_A (MerR family regulatory protein, GyrI-like small molecule binding domain, MerR HTH family regulatory protein)
Binding Sites: 3q3d_B
Publications: Bachas S, Eginton C, Gunio D, Wade H. Structural contributions to multidrug recognition in the multidrug resistance (MDR) gene regulator, BmrR. Proceedings of the National Academy of Sciences of the United States of America 108:11046-51 (2011). [Pubmed]

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