DNA Binding Motif
| Accessions: | Cra (RegulonDB 7.5) |
| Names: | Cra, Cra DNA-binding transcriptional dual regulator |
| Organisms: | ECK12 |
| Libraries: | RegulonDB 7.5 1 1 Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muniz-Rascado L, Garcia-Sotelo JS, Weiss V, Solano-Lira H, Martinez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernandez S, Alquicira-Hernandez K, Lopez-Fuentes A, Porron-Sotelo L, Huerta AM, Bonavides-Martinez C, Balderas-Martinez YI, Pannier L, Olvera M, Labastida A, Jimenez-Jacinto V, Vega-Alvarado L, Del Moral-Chavez V, Hernandez-Alvarez A, Morett E, Collado-Vides J. RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more. Nucleic Acids Res. 2013 Jan 1;41(D1):D203-D213. [Pubmed] |
| Length: | 18 |
| Consensus: | kwGCTGAAwCGwTTmAry |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 5 7 10 10 k 02 15 3 3 11 w 03 4 0 25 3 G 04 2 24 5 1 C 05 4 0 2 26 T 06 6 0 24 2 G 07 31 0 1 0 A 08 31 0 0 1 A 09 10 0 1 21 w 10 0 27 1 4 C 11 3 1 27 1 G 12 9 6 5 12 w 13 2 0 4 26 T 14 6 4 0 22 T 15 11 18 0 3 m 16 22 1 4 5 A 17 13 4 13 2 r 18 1 8 6 17 y |
| Binding TFs: | ECK120004808 (Bacterial regulatory proteins, lacI family, Periplasmic binding proteins and sugar binding domain of LacI family, Periplasmic binding protein-like domain, Periplasmic binding protein domain) |
| Binding Sites: | ECK120013116 ECK120013299 ECK120013384 ECK120013568 ECK120013645 ECK120013774 ECK120013776 ECK120013778 ECK120014083 ECK120014095 ECK120014161 ECK120015594 ECK120048912 ECK120048915 ECK120048991 ECK125134869 ECK125134872 ECK125134874 ECK125134876 ECK125134878 ECK125134880 ECK125134882 ECK125134884 ECK125134886 ECK125134888 ECK125134890 ECK125134892 ECK125134940 ECK125140726 ECK125140728 ECK125140730 ECK125140732 |
| Publications: | Mikulskis A., Aristarkhov A., Lin EC. Regulation of expression of the ethanol dehydrogenase gene (adhE) in Escherichia coli by catabolite repressor activator protein Cra. J Bacteriol. 179(22):7129-34 (1997). [Pubmed] Kaga N., Umitsuki G., Clark DP., Nagai K., Wachi M. Extensive overproduction of the AdhE protein by rng mutations depends on mutations in the cra gene or in the Cra-box of the adhE promoter. Biochem Biophys Res Commun. 295(1):92-7 (2002). [Pubmed] Saier MH., Ramseier TM. The catabolite repressor/activator (Cra) protein of enteric bacteria. J Bacteriol. 178(12):3411-7 (1996). [Pubmed] |
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