DNA Binding Motif

						

			
Accessions: CG17181_SOLEXA_5_FBgn0035144 (FlyZincFinger 1.0 )

			
Names: CG17181
Organisms: Drosophila melanogaster
Libraries: FlyZincFinger 1.0  1
1 Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed]
Length: 15
Consensus: aaCCACCTGTtrmmm
Weblogo: 
PSSM: P0      A      C      G      T
01    200     55     90     73      a
02    298    140    108     25      a
03     96    490     27     20      C
04     37    565     12     19      C
05    597      3      2     31      A
06      3    624      0      6      C
07      0    607      6     20      C
08      6      0      7    620      T
09      0      0    610     23      G
10     29    143      9    452      T
11    104    119     75    335      t
12    219    116    234     64      r
13    247    181    126     79      m
14    161    211    127    126      m
15    166    201    130    109      m
Binding TFs: CG17181 (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
			
Publications: Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.