DNA Binding Motif

Accessions: 2mf8_A (3D-footprint 2022-04-03)
Names: Myelin transcription factor 1
Organisms: Mus musculus
Libraries: 3D-footprint 2022-04-03 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: HADDOCK model of MyT1 F4F5 - DNA complex
Length: 7
Consensus: aAAgTTc
Weblogo:
PSSM: P0 A C G T
01 57 13 13 13 a
02 96 0 0 0 A
03 96 0 0 0 A
04 13 13 56 14 g
05 0 0 0 96 T
06 0 0 0 96 T
07 19 39 19 19 c
Binding TFs: 2mf8_A (Zinc finger, C2HC type)
Binding Sites: 2mf8_B
2mf8_C
Publications: Gamsjaeger R, O'Connell M.R, Cubeddu L, Shepherd N.E, Lowry J.A, Kwan A.H, Vandevenne M, Swanton M.K, Matthews J.M, Mackay J.P. A structural analysis of DNA binding by myelin transcription factor 1 double zinc fingers. The Journal of biological chemistry 288:35180-91 (2013). [Pubmed]

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