DNA Binding Motif

						

			
Accessions: M0661 (AthalianaCistrome v4_May2016)

			
Names: ANAC055.DAP, T14398;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 21
Consensus: wktcdwrtwhwwYACGkmWyy
Weblogo: 
PSSM: P0      A      C      G      T
01    213     39    119    223      w
02    143     18    150    283      k
03    111    121    127    235      t
04     82    372     20    120      c
05    175     88    173    158      d
06    289     22     68    215      w
07    203     96    157    138      r
08    124     70     38    362      t
09    158    136     90    210      w
10    156    156    100    182      h
11    159    113    113    209      w
12    305     29     90    170      w
13      1    430      3    160      Y
14    594      0      0      0      A
15      1    593      0      0      C
16      0      0    594      0      G
17     26     68    153    347      k
18    355    203      2     34      m
19    422      0      3    169      W
20     71    311     54    158      y
21     44    195     32    323      y
Binding TFs: T14398 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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