DNA Binding Motif

Accessions: 1xsd_A (3D-footprint 20231221)
Names: penicillinase repressor
Organisms: Staphylococcus aureus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal structure of the BlaI repressor in complex with DNA
Length: 6
Consensus: TGTAgt
Weblogo:
PSSM: P0 A C G T
01 4 4 4 84 T
02 0 0 96 0 G
03 0 0 0 96 T
04 96 0 0 0 A
05 12 12 60 12 g
06 16 16 19 45 t
Binding TFs: 1xsd_A (MarR family, Penicillinase repressor)
Binding Sites: 1xsd_B
Publications: Safo M.K, Zhao Q, Ko T.P, Musayev F.N, Robinson H, Scarsdale N, Wang A.H, Archer G.L. Crystal structures of the BlaI repressor from Staphylococcus aureus and its complex with DNA: insights into transcriptional regulation of the bla and mec operons. Journal of bacteriology 187:1833-44 (2005). [Pubmed]

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