DNA Binding Motif
| Accessions: | MA0047.2 (JASPAR 2024) |
| Names: | Foxa2 |
| Organisms: | Mus musculus |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 12 |
| Consensus: | TRTTTACwywgg |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 1 1 1 805 T 02 221 3 582 3 R 03 1 1 1 806 T 04 1 3 36 769 T 05 1 1 175 634 T 06 736 4 67 3 A 07 2 725 2 81 C 08 338 77 3 391 w 09 50 265 58 436 y 10 417 6 24 360 w 11 131 53 482 140 g 12 129 195 290 189 g |
| Type: | Heterodimer |
| Binding TFs: | P35583 (Fork head domain, Forkhead N-terminal region, HNF3 C-terminal domain) P35583 |
| Binding Sites: | MA0047.2.1 MA0047.2.10 MA0047.2.11 MA0047.2.12 MA0047.2.13 MA0047.2.14 MA0047.2.15 MA0047.2.16 MA0047.2.17 MA0047.2.18 MA0047.2.19 MA0047.2.2 MA0047.2.20 MA0047.2.3 MA0047.2.4 MA0047.2.5 MA0047.2.6 MA0047.2.7 MA0047.2.8 MA0047.2.9 |
| Publications: | Tuteja G, White P, Schug J, Kaestner K.H. Extracting transcription factor targets from ChIP-Seq data. Nucleic acids research 37:e113 (2009). [Pubmed] |
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