DNA Binding Motif

Accessions: M3433_1.02 (CISBP 1.02)
Names: HOXA3, T093249_1.02
Organisms: Homo sapiens
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Length: 9
Consensus: csTawtdkk
01 0.0714 0.6429 0.2143 0.0714 c
02 0.2143 0.3571 0.3571 0.0714 s
03 0.0714 0.0714 0.0714 0.7857 T
04 0.6429 0.0000 0.1429 0.2143 a
05 0.4286 0.1429 0.1429 0.2857 w
06 0.2143 0.0714 0.2143 0.5000 t
07 0.2857 0.0714 0.2857 0.3571 d
08 0.0714 0.0714 0.5000 0.3571 k
09 0.0714 0.2143 0.3571 0.3571 k
Binding TFs: T093249_1.02 (Homeobox domain, Domain of unknown function (DUF4074))
Publications: Matys V, Kel-Margoulis O.V, Fricke E, Liebich I, Land S, Barre-Dirrie A, Reuter I, Chekmenev D, Krull M, Hornischer K, Voss N, Stegmaier P, Lewicki-Potapov B, Saxel H, Kel A.E, Wingender E. TRANSFAC and its module TRANSCompel: transcriptional gene regulation in eukaryotes. Nucleic acids research 34:D108-10 (2006). [Pubmed]


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research.