DNA Binding Motif

Accessions: MA0145.2 (JASPAR 2024)
Names: Tcfcp2l1, Tfcp2l1
Organisms: Mus musculus
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 14
Consensus: CCrGyyyrarCCrG
Weblogo:
PSSM: P0 A C G T
01 8 3768 255 40 C
02 285 3304 22 465 C
03 2437 21 1117 507 r
04 24 98 3949 12 G
05 710 1380 103 1890 y
06 402 1183 253 2246 y
07 707 1630 616 1134 y
08 1462 922 1026 681 r
09 2585 286 780 441 a
10 1612 212 1263 1003 r
11 16 3811 223 34 C
12 253 3324 12 491 C
13 2199 30 1232 612 r
14 49 118 3881 17 G
Type: Heterodimer
Binding TFs: Q3UNW5 (CP2 transcription factor)
Q3UNW5
Publications: Chen X, Xu H, Yuan P, Fang F, Huss M, Vega V.B, Wong E, Orlov Y.L, Zhang W, Jiang J, Loh Y.H, Yeo H.C, Yeo Z.X, Narang V, Govindarajan K.R, Leong B, Shahab A, Ruan Y, Bourque G, Sung W.K, Clarke N.D, Wei C.L, Ng H.H. Integration of external signaling pathways with the core transcriptional network in embryonic stem cells. Cell 133:1106-17 (2008). [Pubmed]

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