DNA Binding Motif
| Accessions: | MA1206.1 (JASPAR 2024), M0141 (AthalianaCistrome v4_May2016) |
| Names: | ARF2, ARF2.DAP, T21371; |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1, AthalianaCistrome v4_May2016 2 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] 2 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed] |
| Notes: | DAP-seq |
| Length: | 10 |
| Consensus: | wdsmGACAar |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 245 116 50 188 w 02 151 61 193 194 d 03 0 395 204 0 s 04 200 384 15 0 m 05 112 0 487 0 G 06 559 0 40 0 A 07 0 599 0 0 C 08 562 37 0 0 A 09 271 57 131 140 a 10 219 87 207 86 r |
| Type: | Heterodimer |
| Binding TFs: | Q94JM3 / T21371 (AUX/IAA family, B3 DNA binding domain, Auxin response factor) Q94JM3 |
| Binding Sites: | MA1206.1.1 MA1206.1.10 MA1206.1.11 MA1206.1.12 MA1206.1.13 MA1206.1.14 MA1206.1.15 MA1206.1.16 MA1206.1.17 MA1206.1.18 MA1206.1.19 MA1206.1.2 MA1206.1.20 MA1206.1.3 MA1206.1.4 MA1206.1.5 MA1206.1.6 MA1206.1.7 MA1206.1.8 MA1206.1.9 |
| Publications: | Zhang JY, He SB, Li L, Yang HQ. Auxin inhibits stomatal development through MONOPTEROS repression of a mobile peptide gene STOMAGEN in mesophyll. Proc Natl Acad Sci U S A : (2014). [Pubmed] O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.