DNA Binding Motif

Accessions: ZNF45_ChIP (humanC2H2ZF-ChIP Feb2015)
Names: ZNF45
Organisms: Homo sapiens
Libraries: humanC2H2ZF-ChIP Feb2015 1
1 Najafabadi HS, Mnaimneh S, Schmitges FW, Garton M, Lam KN, Yang A, Albu M, Weirauch MT, Radovani E, Kim PM, Greenblatt J, Frey BJ, Hughes TR. C2H2 zinc finger proteins greatly expand the human regulatory lexicon. Nat Biotechnol 33:555-62 (2015). [Pubmed]
Length: 15
Consensus: ATAACArAATCCAGa
Weblogo:
PSSM: P0 A C G T
01 0.8763 0.0206 0.1031 0.0000 A
02 0.0412 0.2062 0.0206 0.7320 T
03 0.9691 0.0103 0.0206 0.0000 A
04 0.8814 0.0155 0.0412 0.0619 A
05 0.0155 0.9691 0.0000 0.0155 C
06 0.8660 0.0361 0.0103 0.0876 A
07 0.4691 0.0515 0.4330 0.0464 r
08 0.9845 0.0000 0.0052 0.0103 A
09 0.9691 0.0052 0.0000 0.0258 A
10 0.0052 0.1340 0.0258 0.8351 T
11 0.0412 0.9278 0.0155 0.0155 C
12 0.0206 0.8351 0.0000 0.1443 C
13 0.9639 0.0000 0.0206 0.0155 A
14 0.0670 0.0361 0.8763 0.0206 G
15 0.6392 0.1701 0.0412 0.1495 a
Binding TFs: ZNF45 (Zinc finger, C2H2 type, KRAB box, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
Publications: Najafabadi HS, Mnaimneh S, Schmitges FW, Garton M, Lam KN, Yang A, Albu M, Weirauch MT, Radovani E, Kim PM, Greenblatt J, Frey BJ, Hughes TR. C2H2 zinc finger proteins greatly expand the human regulatory lexicon. Nat Biotechnol 33:555-62 (2015). [Pubmed]

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.