DNA Binding Motif

Accessions: 5jub_B (3D-footprint 20231221)
Names: Transcriptional regulator
Organisms: strain ATCC BAA-491 / LMD-9, Streptococcus thermophilus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal structure of ComR from S.thermophilus in complex with DNA and its signalling peptide ComS.
Length: 5
Consensus: TGTCA
Weblogo:
PSSM: P0 A C G T
01 0 0 0 96 T
02 9 11 67 9 G
03 11 9 9 67 T
04 9 69 9 9 C
05 96 0 0 0 A
Binding TFs: 5jub_B (Helix-turn-helix, Helix-turn-helix domain)
Binding Sites: 5jub_X
5jub_Z
Publications: Talagas A, Fontaine L, Ledesma-Garca L, Mignolet J, Li de la Sierra-Gallay I, Lazar N, Aumont-Nicaise M, Federle MJ, Prehna G, Hols P, Nessler S. Structural Insights into Streptococcal Competence Regulation by the Cell-to-Cell Communication System ComRS. PLoS Pathog : (2016). [Pubmed]

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