DNA Binding Motif
| Accessions: | 3brd_A (3D-footprint 20231221) |
| Names: | Lin-12 and glp-1 phenotype protein 1, isoform a |
| Organisms: | Caenorhabditis elegans |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Description: | CSL (Lag-1) bound to DNA with Lin-12 RAM peptide, P212121 |
| Length: | 5 |
| Consensus: | TGGGa |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0 10 10 76 T 02 0 0 96 0 G 03 10 10 66 10 G 04 0 0 96 0 G 05 64 12 10 10 a |
| Binding TFs: | 3brd_A (IPT/TIG domain, Beta-trefoil DNA-binding domain, LAG1, DNA binding) |
| Binding Sites: | 3brd_B 3brd_C |
| Publications: | Friedmann D.R, Wilson J.J, Kovall R.A. RAM-induced allostery facilitates assembly of a notch pathway active transcription complex. The Journal of biological chemistry 283:14781-91 (2008). [Pubmed] |
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