DNA Binding Motif

						

			
Accessions: 1c9b_QR (3D-footprint 20231221)

			
Names: TATA BOX BINDING PROTEIN
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: CRYSTAL STRUCTURE OF A HUMAN TBP CORE DOMAIN-HUMAN TFIIB CORE DOMAIN COMPLEX BOUND TO AN EXTENDED, MODIFIED ADENOVIRAL MAJOR LATE PROMOTER (ADMLP)
Length: 8
Consensus: tATAAaAg
Weblogo: 
PSSM: P0      A      C      G      T
01     10     10     13     63      t
02     96      0      0      0      A
03      7      7      8     74      T
04     96      0      0      0      A
05     85      3      3      5      A
06     56     13     13     14      a
07     96      0      0      0      A
08     19     19     38     20      g
Binding TFs: 1c9b_R (Transcription factor TFIID (or TATA-binding protein, TBP))
Binding Sites: 1c9b_S
1c9b_T
			
Publications: Tsai F.T, Sigler P.B. Structural basis of preinitiation complex assembly on human pol II promoters. The EMBO journal 19:25-36 (2000). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.