DNA Binding Motif

Accessions: E2Fb (Athamap 20091028)
Names: E2Fb
Organisms: Arabidopsis thaliana
Libraries: Athamap 20091028 1
1 Bulow L, Engelmann S, Schindler M, Hehl R. AthaMap, integrating transcriptional and post-transcriptional data. Nucleic acids research 37:D983-6 (2009). [Pubmed]
Length: 8
Consensus: WTTCCCGC
Weblogo:
PSSM: P0 A C G T
01 1 0 0 3 W
02 0 0 0 4 T
03 0 0 0 4 T
04 0 4 0 0 C
05 0 4 0 0 C
06 0 4 0 0 C
07 0 0 4 0 G
08 0 4 0 0 C
Binding TFs: E2Fb (E2F/DP family winged-helix DNA-binding domain)
Binding Sites: E2Fb_1
E2Fb_3
E2Fb_4
E2Fb_2
Publications: de Jager S. M., Menges M., Bauer U. M., Murra J. A. Arabidopsis E2F1 binds a sequence present in the promoter of S-phase-regulated gene AtCDC6 and is a member of a multigene family with differential activities.. Plant Mol. Biol. 47:555-568 (2001). [Pubmed]

Mariconti L, Pellegrini B, Cantoni R, Stevens R, Bergounioux C, Cella R, Albani D. 2002. The E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plants. J Biol Chem. 277:9911-9. [Pubmed]

Egelkrout EM, Mariconti L, Settlage SB, Cella R, Robertson D, Hanley-Bowdoin L. 2002. Two E2F elements regulate the proliferating cell nuclear antigen promoter differently during leaf development. Plant Cell. 14:3225-36. [Pubmed]

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