DNA Binding Motif

Accessions: 1dgc_A (3D-footprint 20231221)
Names: PROTEIN (GCN4)
Organisms: Saccharomyces cerevisiae, Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: THE X-RAY STRUCTURE OF THE GCN4-BZIP BOUND TO ATF/CREB SITE DNA SHOWS THE COMPLEX DEPENDS ON DNA FLEXIBILITY
Length: 5
Consensus: CGTca
Weblogo:
PSSM: P0 A C G T
01 7 74 7 8 C
02 9 9 69 9 G
03 9 11 9 67 T
04 12 60 12 12 c
05 38 19 19 20 a
Binding TFs: 1dgc_A (bZIP transcription factor, Basic region leucine zipper)
Binding Sites: 1dgc_B
Publications: König P, Richmond T.J. The X-ray structure of the GCN4-bZIP bound to ATF/CREB site DNA shows the complex depends on DNA flexibility. Journal of molecular biology 233:139-54 (1993). [Pubmed]

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