DNA Binding Motif

Accessions: MA0476.1 (JASPAR 2018)
Names: FOS
Organisms: Homo sapiens
Libraries: JASPAR 2018 1
1 Khan A, Fornes O, Stigliani A, Gheorghe M, Castro-Mondragon JA, van der Lee R, Bessy A, Cheneby , Kulkarni SR, Tan G, Baranasic D, Arenillas DJ, Sandelin A, Vandepoele K, Lenhard B, Ballester B, Wasserman WW, Parcy F, Mathelier A (2017) JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework. Nucleic Acids Res. doi: 10.1093/nar/gkx1126 [Pubmed]
Notes: ChIP-seq
Length: 11
Consensus: dvTGAsTCATb
Weblogo:
PSSM: P0 A C G T
01 7879 712 9686 11119 d
02 7475 10177 10841 903 v
03 0 0 0 29396 T
04 0 0 27108 2288 G
05 29396 0 0 0 A
06 998 14079 11206 3113 s
07 0 0 0 29396 T
08 0 29396 0 0 C
09 29396 0 0 0 A
10 258 5823 1538 21777 T
11 4006 8236 7897 9257 b
Binding TFs: P01100 (bZIP transcription factor, Basic region leucine zipper)
Binding Sites: MA0476.1.1
MA0476.1.10
MA0476.1.11
MA0476.1.12
MA0476.1.13
MA0476.1.14
MA0476.1.15
MA0476.1.16
MA0476.1.17
MA0476.1.18
MA0476.1.19
MA0476.1.2
MA0476.1.20
MA0476.1.3
MA0476.1.4
MA0476.1.5
MA0476.1.6
MA0476.1.7
MA0476.1.8
MA0476.1.9
Publications: Portales-Casamar E, Kirov S, Lim J, Lithwick S, Swanson M.I, Ticoll A, Snoddy J, Wasserman W.W. PAZAR: a framework for collection and dissemination of cis-regulatory sequence annotation. Genome biology 8:R207 (2007). [Pubmed]

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