DNA Binding Motif

Accessions: 1kb4_B (3D-footprint 2022-04-03)
Names: Vitamin D3 Receptor
Organisms: Homo sapiens
Libraries: 3D-footprint 2022-04-03 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal Structure of VDR DNA-binding Domain Bound to a Canonical Direct Repeat with Three Base Pair Spacer (DR3) Response Element
Length: 5
Consensus: TGACC
01 9 11 9 67 T
02 11 9 67 9 G
03 67 11 9 9 A
04 0 96 0 0 C
05 0 96 0 0 C
Binding TFs: 1kb4_B (Zinc finger, C4 type (two domains))
Binding Sites: 1kb4_C
Publications: Shaffer P.L, Gewirth D.T. Structural basis of VDR-DNA interactions on direct repeat response elements. The EMBO journal 21:2242-52 (2002). [Pubmed]


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research.