DNA Binding Motif

Accessions: 4h10_A (3D-footprint 20231221)
Names: Aryl hydrocarbon receptor nuclear translocator-like protein 1
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Intermolecular recognition revealed by the complex structure of human CLOCK-BMAL1 basic Helix-Loop-Helix domains with E-box DNA
Length: 5
Consensus: TCAcg
Weblogo:
PSSM: P0 A C G T
01 0 0 0 96 T
02 0 96 0 0 C
03 96 0 0 0 A
04 13 54 13 16 c
05 13 13 57 13 g
Binding TFs: 4h10_A (Helix-loop-helix DNA-binding domain)
Binding Sites: 4h10_C
4h10_D
Publications: Wang Z, Wu Y, Li L, Su X.D. Intermolecular recognition revealed by the complex structure of human CLOCK-BMAL1 basic helix-loop-helix domains with E-box DNA. Cell research : (2012). [Pubmed]

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