DNA Binding Motif
| Accessions: | MA0079.3 (JASPAR 2024) |
| Names: | SP1 |
| Organisms: | Homo sapiens, Rattus norvegicus |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 11 |
| Consensus: | gCCCCkCCCCy |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 857 1786 4271 1820 g 02 0 6215 642 1877 C 03 99 6703 0 1932 C 04 0 8734 0 0 C 05 0 8661 0 73 C 06 1359 0 4624 2751 k 07 0 8734 0 0 C 08 0 8734 0 0 C 09 0 6679 0 2055 C 10 1054 6357 0 1323 C 11 652 4969 734 2379 y |
| Type: | Heterodimer |
| Binding TFs: | P08047 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) P08047 |
| Binding Sites: | MA0079.3.1 MA0079.3.10 MA0079.3.11 MA0079.3.12 MA0079.3.13 MA0079.3.14 MA0079.3.15 MA0079.3.16 MA0079.3.17 MA0079.3.18 MA0079.3.19 MA0079.3.2 MA0079.3.20 MA0079.3.3 MA0079.3.4 MA0079.3.5 MA0079.3.6 MA0079.3.7 MA0079.3.8 MA0079.3.9 |
| Publications: | Portales-Casamar E, Kirov S, Lim J, Lithwick S, Swanson M.I, Ticoll A, Snoddy J, Wasserman W.W. PAZAR: a framework for collection and dissemination of cis-regulatory sequence annotation. Genome biology 8:R207 (2007). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.