DNA Binding Motif

Accessions: JDP2_methyl_6 (HT-SELEX2 May2017)
Names: JDP2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: srTGAsTCAys
Weblogo:
PSSM: P0 A C G T
01 991 1799 1694 1208 s
02 3143 1002 2549 329 r
03 0 271 6 5692 T
04 20 177 5692 846 G
05 5692 1190 104 640 A
06 473 2809 2883 493 s
07 696 144 1010 5692 T
08 830 5692 196 100 C
09 5692 9 311 0 A
10 342 2600 887 3092 y
11 1192 1764 1787 950 s
Binding TFs: JDP2 (bZIP transcription factor, Basic region leucine zipper)
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.