DNA Binding Motif

Accessions: 6fbr_B (3D-footprint 20231221)
Names: Retinoic acid receptor RXR-alpha
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal Structure of the Human Retinoid X Receptor DNA-Binding Domain Bound to the Human MEp DR1 Response Element, pH 4.2
Length: 5
Consensus: tGaAC
Weblogo:
PSSM: P0 A C G T
01 13 13 13 57 t
02 0 0 96 0 G
03 54 13 13 16 a
04 96 0 0 0 A
05 0 96 0 0 C
Binding TFs: 6fbr_B (Zinc finger, C4 type (two domains))
Binding Sites: 6fbr_C
6fbr_D
Publications: Osz J, McEwen AG, Wolf J, Poussin-Courmontagne P, Peluso-Iltis C, Chebaro Y, Kieffer B, Rochel N. Modulation of RXR-DNA complex assembly by DNA context. Mol Cell Endocrinol : (2019). [Pubmed]

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