DNA Binding Motif

Accessions: MA0474.1 (JASPAR 2024)
Names: Erg
Organisms: Mus musculus
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 11
Consensus: rsAGGAAGtrr
Weblogo:
PSSM: P0 A C G T
01 9430 231 5874 1192 r
02 1473 10483 4736 35 s
03 16007 693 27 0 A
04 0 0 16727 0 G
05 0 0 16727 0 G
06 16727 0 0 0 A
07 16580 0 0 147 A
08 3244 0 13483 0 G
09 1570 4038 2146 8973 t
10 4953 1498 8204 2072 r
11 4558 2474 8042 1653 r
Type: Heterodimer
Binding TFs: P81270 (Ets-domain, Sterile alpha motif (SAM)/Pointed domain)
P81270
Binding Sites: MA0474.1.1
MA0474.1.10
MA0474.1.11
MA0474.1.12
MA0474.1.13
MA0474.1.14
MA0474.1.15
MA0474.1.16
MA0474.1.17
MA0474.1.18
MA0474.1.19
MA0474.1.2
MA0474.1.20
MA0474.1.3
MA0474.1.4
MA0474.1.5
MA0474.1.6
MA0474.1.7
MA0474.1.8
MA0474.1.9
Publications: Nhili R, Peixoto P, Depauw S, Flajollet S, Dezitter X, Munde M.M, Ismail M.A, Kumar A, Farahat A.A, Stephens C.E, Duterque-Coquillaud M, David Wilson W, Boykin D.W, David-Cordonnier M.H. Targeting the DNA-binding activity of the human ERG transcription factor using new heterocyclic dithiophene diamidines. Nucleic acids research 41:125-38 (2013). [Pubmed]

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.