DNA Binding Motif

Accessions: 3vek_F (3D-footprint 20231221)
Names: Erythroid transcription factor
Organisms: Mus musculus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Both Zn Fingers of GATA1 Bound to Palindromic DNA Recognition Site, P1 Crystal Form
Length: 10
Consensus: TTATCAGAtg
Weblogo:
PSSM: P0 A C G T
01 6 6 6 78 T
02 4 4 4 84 T
03 96 0 0 0 A
04 0 0 0 96 T
05 6 78 6 6 C
06 96 0 0 0 A
07 7 8 74 7 G
08 88 2 4 2 A
09 13 13 14 56 t
10 19 19 39 19 g
Binding TFs: 3vek_F (GATA zinc finger)
Binding Sites: 3vek_D
3vek_E

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.