DNA Binding Motif
| Accessions: | MA0559.1 (JASPAR 2024) |
| Names: | PI |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 14 |
| Consensus: | mCaAAArwrGAAAr |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 156 335 48 19 m 02 57 394 44 63 C 03 357 79 67 55 a 04 448 12 83 15 A 05 551 1 4 2 A 06 498 0 12 48 A 07 301 8 244 5 r 08 312 14 69 163 w 09 231 0 327 0 r 10 7 6 545 0 G 11 446 54 7 51 A 12 495 7 24 32 A 13 456 26 60 16 A 14 256 58 199 45 r |
| Type: | Heterodimer |
| Binding TFs: | P48007 (SRF-type transcription factor (DNA-binding and dimerisation domain), K-box region) P48007 |
| Binding Sites: | MA0559.1.1 MA0559.1.10 MA0559.1.11 MA0559.1.12 MA0559.1.13 MA0559.1.14 MA0559.1.15 MA0559.1.16 MA0559.1.17 MA0559.1.18 MA0559.1.19 MA0559.1.2 MA0559.1.20 MA0559.1.3 MA0559.1.4 MA0559.1.5 MA0559.1.6 MA0559.1.7 MA0559.1.8 MA0559.1.9 |
| Publications: | Riechmann J. L., Wang M., Meyerowitz E. M. DNA-binding properties of Arabidopsis MADS domain homeotic proteins APETALA1, APETALA3, PISTILLATA and AGAMOUS. Nucleic Acids Res. 24:3134-3141 (1996). [Pubmed] |
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