DNA Binding Motif

						

			
Accessions: shn-ZFP1 (DrosophilaTF 1.1)

			
Names: shn-ZFP1
Organisms: Drosophila melanogaster
Libraries: DrosophilaTF 1.1 1
1 Down T.A, Bergman C.M, Su J, Hubbard T.J. Large-scale discovery of promoter motifs in Drosophila melanogaster. PLoS computational biology 3:e7 (2007). [Pubmed]
Length: 12
Consensus: GGGAwCGTTCCC
Weblogo: 
PSSM: P0      A      C      G      T
01      0      0      1      0      G
02      0      0      1      0      G
03      0      0    0.8    0.2      G
04      1      0      0      0      A
05   0.47   0.13      0    0.4      w
06      0   0.93      0   0.07      C
07      0      0      1      0      G
08      0      0   0.07   0.93      T
09      0   0.07      0   0.93      T
10      0      1      0      0      C
11      0      1      0      0      C
12   0.07    0.8      0   0.13      C
Binding TFs: shn-ZFP1 (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
			
Publications: Dai H., Hogan C., Gopalakrishnan B., Torres-Vazquez J., Nguyen M., Park S., Raftery L. A., Warrior R., Arora K. The zinc finger protein schnurri acts as a Smad partner in mediating the transcriptional response to decapentaplegic.. Dev. Biol. 227:373-387 (2000). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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