DNA Binding Motif

						

			
Accessions: M0363 (AthalianaCistrome v4_May2016)

			
Names: DEL2.DAP, T25720;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 20
Consensus: wwwwdtTTTTGGCGGGAAAA
Weblogo: 
PSSM: P0      A      C      G      T
01    192     25    111    248      w
02    234     25     56    261      w
03    317     23     65    171      w
04    185    138     49    204      w
05    180     29    166    201      d
06    131     18    103    324      t
07     61     11     21    483      T
08     38      3      4    531      T
09     28      4     12    532      T
10     21      0     12    543      T
11      7      7    550     12      G
12      2      0    574      0      G
13     15    550      0     11      C
14      5      0    571      0      G
15      0      8    566      2      G
16     33      6    532      5      G
17    570      0      6      0      A
18    565      2      7      2      A
19    527     15     12     22      A
20    399     41     18    118      A
Binding TFs: T25720 (E2F/DP family winged-helix DNA-binding domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.