DNA Binding Motif

						

			
Accessions: MA0601.1 (JASPAR 2024)

			
Names: Arid3b
Organisms: Mus musculus
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 11
Consensus: awaTTAATwaa
Weblogo: 
PSSM: P0      A      C      G      T
01    468    177    177    177      a
02    273     80     80    566      w
03    609    119     34    238      a
04    104      0      0    895      T
05      0      0      0   1000      T
06   1000      0      0      0      A
07    911      0      0     89      A
08     89      0      0    911      T
09    262    168     73    498      w
10    490    170    170    170      a
11    351    216    216    216      a
Type: Heterodimer
Binding TFs: Q9Z1N7 (ARID/BRIGHT DNA binding domain)
Q9Z1N7
			
Publications: Herrscher R.F, Kaplan M.H, Lelsz D.L, Das C, Scheuermann R, Tucker P.W. The immunoglobulin heavy-chain matrix-associating regions are bound by Bright: a B cell-specific trans-activator that describes a new DNA-binding protein family. Genes & development 9:3067-82 (1995). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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