DNA Binding Motif

						

			
Accessions: MA0262.1 (JASPAR 2024)

			
Names: mab-3
Organisms: Caenorhabditis elegans
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: EMSA
Length: 13
Consensus: AATGTTGCgwwwT
Weblogo: 
PSSM: P0      A      C      G      T
01     76      3     13      8      A
02     86      0      0     14      A
03      0      1      0     99      T
04      0      0    100      0      G
05      0      0      0    100      T
06      0      0      0    100      T
07      0      0    100      0      G
08      0    100      0      0      C
09     13     19     67      1      g
10     62      0     11     27      w
11     50      0      6     44      w
12     29     13     22     36      w
13      8      8     10     74      T
Type: Heterodimer
Binding TFs: O18214 (DM DNA binding domain)
O18214
			
Publications: Yi W, Zarkower D. Similarity of DNA binding and transcriptional regulation by Caenorhabditis elegans MAB-3 and Drosophila melanogaster DSX suggests conservation of sex determining mechanisms. Development (Cambridge, England) 126:873-81 (1999). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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