DNA Binding Motif
| Accessions: | MA0940.1 (JASPAR 2024) |
| Names: | AP1 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 13 |
| Consensus: | myAAAAAwrGAAA |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 734 799 32 57 m 02 84 941 39 558 y 03 1323 46 35 218 A 04 1134 19 152 317 A 05 1551 10 15 46 A 06 1277 15 24 306 A 07 1191 23 252 156 A 08 682 21 257 662 w 09 653 12 930 27 r 10 133 60 1354 75 G 11 1146 153 170 153 A 12 1279 122 168 53 A 13 1257 22 162 181 A |
| Type: | Heterodimer |
| Binding TFs: | P35631 (SRF-type transcription factor (DNA-binding and dimerisation domain), K-box region) P35631 |
| Binding Sites: | MA0940.1.1 MA0940.1.10 MA0940.1.11 MA0940.1.12 MA0940.1.13 MA0940.1.14 MA0940.1.15 MA0940.1.16 MA0940.1.17 MA0940.1.18 MA0940.1.19 MA0940.1.2 MA0940.1.20 MA0940.1.3 MA0940.1.4 MA0940.1.5 MA0940.1.6 MA0940.1.7 MA0940.1.8 MA0940.1.9 |
| Publications: | Riechmann J. L., Wang M., Meyerowitz E. M. DNA-binding properties of Arabidopsis MADS domain homeotic proteins APETALA1, APETALA3, PISTILLATA and AGAMOUS. Nucleic Acids Res. 24:3134-3141 (1996). [Pubmed] |
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