DNA Binding Motif

						

			
Accessions: eyg (DrosophilaTF 1.1)

			
Names: eyg
Libraries: DrosophilaTF 1.1 1
1 Down T.A, Bergman C.M, Su J, Hubbard T.J. Large-scale discovery of promoter motifs in Drosophila melanogaster. PLoS computational biology 3:e7 (2007). [Pubmed]
Length: 19
Consensus: kvrtryTCACTSAgtvyky
Weblogo: 
PSSM: P0      A      C      G      T
01   0.15   0.15   0.42   0.28      k
02   0.42   0.29   0.26   0.03      v
03   0.33   0.07   0.45   0.15      r
04   0.08   0.11   0.21    0.6      t
05   0.45   0.05   0.43   0.07      r
06   0.23    0.3   0.18   0.29      y
07      0   0.12   0.05   0.83      T
08      0   0.87   0.03    0.1      C
09      1      0      0      0      A
10   0.02   0.98      0      0      C
11      0      0      0      1      T
12   0.01   0.26   0.73      0      S
13   0.73   0.03   0.24      0      A
14    0.2   0.18   0.42    0.2      g
15   0.14   0.15   0.16   0.55      t
16   0.38   0.27    0.3   0.05      v
17   0.21   0.37   0.15   0.27      y
18   0.23   0.04   0.43    0.3      k
19   0.16   0.37   0.18   0.29      y
Binding TFs: eyg
			
Publications: Jun S, Wallen R.V, Goriely A, Kalionis B, Desplan C. Lune/eye gone, a Pax-like protein, uses a partial paired domain and a homeodomain for DNA recognition. Proceedings of the National Academy of Sciences of the United States of America 95:13720-5 (1998). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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