DNA Binding Motif

						

			
Accessions: 3lnq_A (3D-footprint 20231221)

			
Names: Homeobox protein aristaless
Organisms: Drosophila melanogaster
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Structure of Aristaless homeodomain in complex with DNA
Length: 7
Consensus: TTATTAA
Weblogo: 
PSSM: P0      A      C      G      T
01      6      0      6     84      T
02      8      6      6     76      T
03     70      6     12      8      A
04      0      0      0     96      T
05      0      0      0     96      T
06     70      6     14      6      A
07     83      6      1      6      A
Binding TFs: 3lnq_A (Homeobox domain)
Binding Sites: 3lnq_B
3lnq_C
			
Publications: Miyazono K, Zhi Y, Takamura Y, Nagata K, Saigo K, Kojima T, Tanokura M. Cooperative DNA-binding and sequence-recognition mechanism of aristaless and clawless. The EMBO journal 29:1613-23 (2010). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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