DNA Binding Motif

						

			
Accessions: 6ir8_A (3D-footprint 20231221)

			
Names: OsWRKY45
Organisms: Oryza sativa, Oryza sativa Japonica Group
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Rice WRKY/DNA complex
Length: 7
Consensus: tnnnACC
Weblogo: 
PSSM: P0      A      C      G      T
01     19     19     19     39      t
02     24     24     24     24      n
03     24     24     24     24      n
04     24     24     24     24      n
05     96      0      0      0      A
06      0     96      0      0      C
07      0     77      0     19      C
Binding TFs: 6ir8_A (WRKY DNA -binding domain)
Binding Sites: 6ir8_B
6ir8_C
			
Publications: Cheng X, Zhao Y, Jiang Q, Yang J, Zhao W, Taylor IA, Peng YL, Wang D, Liu J. Structural basis of dimerization and dual W-box DNA recognition by rice WRKY domain. Nucleic Acids Res 47:4308-4318 (2019). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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