DNA Binding Motif

						

			
Accessions: brk (DrosophilaTF 1.1)

			
Names: brk
Organisms: Drosophila melanogaster
Libraries: DrosophilaTF 1.1 1
1 Down T.A, Bergman C.M, Su J, Hubbard T.J. Large-scale discovery of promoter motifs in Drosophila melanogaster. PLoS computational biology 3:e7 (2007). [Pubmed]
Length: 7
Consensus: TGGCGyY
Weblogo: 
PSSM: P0      A      C      G      T
01      0      0 0.0833 0.9167      T
02      0      0      1      0      G
03      0      0      1      0      G
04      0      1      0      0      C
05      0      0      1      0      G
06      0 0.5833      0 0.4167      y
07      0   0.25      0   0.75      Y
Binding TFs: brk (Brinker DNA-binding domain, Helix-turn-helix domain)
Binding Sites: brk_1
brk_10
brk_11
brk_12
brk_2
brk_3
brk_4
brk_5
brk_6
brk_7
brk_8
brk_9
			
Publications: Zhang H, Levine M, Ashe H.L. Brinker is a sequence-specific transcriptional repressor in the Drosophila embryo. Genes & development 15:261-6 (2001). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.