DNA Binding Motif

Accessions: MA0351.1 (JASPAR 2024)
Names: DOT6
Organisms: Saccharomyces cerevisiae
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 21
Consensus: wbykkcwsCTCATCGcvycyt
Weblogo:
PSSM: P0 A C G T
01 278 135 231 354 w
02 194 250 266 289 b
03 156 332 223 287 y
04 131 249 268 351 k
05 239 85 400 273 k
06 141 480 145 232 c
07 516 59 138 285 w
08 79 420 392 107 s
09 29 770 197 3 C
10 6 52 83 858 T
11 1 990 4 2 C
12 972 0 1 25 A
13 1 0 27 969 T
14 0 968 1 28 C
15 36 9 876 78 G
16 223 575 177 22 c
17 280 265 252 202 v
18 188 298 72 441 y
19 163 435 208 192 c
20 153 371 183 290 y
21 185 149 202 462 t
Type: Heterodimer
Binding TFs: P40059 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
P40059
Publications: Newburger D.E, Bulyk M.L. UniPROBE: an online database of protein binding microarray data on protein-DNA interactions. Nucleic acids research 37:D77-82 (2009). [Pubmed]

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