DNA Binding Motif

Accessions: 2wty_AB (3D-footprint 20231221)
Names: TRANSCRIPTION FACTOR MAFB
Organisms: Mus musculus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal structure of the homodimeric MafB in complex with the T-MARE binding site
Length: 13
Consensus: TGCnnACTnAGCA
Weblogo:
PSSM: P0 A C G T
01 9 9 11 67 T
02 0 0 96 0 G
03 0 96 0 0 C
04 24 24 24 24 n
05 24 24 24 24 n
06 96 0 0 0 A
07 9 67 9 11 C
08 0 0 0 96 T
09 24 24 24 24 n
10 67 9 11 9 A
11 0 0 96 0 G
12 0 96 0 0 C
13 96 0 0 0 A
Type: Heterodimer
Binding TFs: 2wty_A (bZIP transcription factor, bZIP Maf transcription factor)
2wty_B (bZIP transcription factor, bZIP Maf transcription factor)
Binding Sites: 2wty_C
2wty_D
Publications: Pogenberg V, Consani Textor L, Vanhille L, Holton S.J, Sieweke M.H, Wilmanns M. Design of a bZip transcription factor with homo/heterodimer-induced DNA-binding preference. Structure (London, England : 1993) 22:466-77 (2014). [Pubmed]

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