DNA Binding Motif

						

			
Accessions: byn (DrosophilaTF 1.1)

			
Names: byn
Organisms: Drosophila melanogaster
Libraries: DrosophilaTF 1.1 1
1 Down T.A, Bergman C.M, Su J, Hubbard T.J. Large-scale discovery of promoter motifs in Drosophila melanogaster. PLoS computational biology 3:e7 (2007). [Pubmed]
Length: 12
Consensus: rwwnTnrCACyT
Weblogo: 
PSSM: P0      A      C      G      T
01    0.5      0    0.5      0      r
02    0.5      0      0    0.5      w
03    0.5      0      0    0.5      w
04   0.25   0.25   0.25   0.25      n
05      0      0      0      1      T
06   0.25   0.25   0.25   0.25      n
07    0.5      0    0.5      0      r
08      0      1      0      0      C
09      1      0      0      0      A
10      0      1      0      0      C
11      0    0.5      0    0.5      y
12      0      0      0      1      T
Binding TFs: byn (T-box)
			
Publications: Kusch Thomas, Storck Tobias, Walldorf Uwe, Reuter Rolf. Brachyury proteins regulate target genes through modular binding sites in a cooperative fashion.. Genes Dev. 16:518-529 (2002). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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