DNA Binding Motif

Accessions: 4z59_A (3D-footprint 20210203)
Names: Antitoxin HipB
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 20210203 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: HipB-O4 20mer complex
Length: 4
Consensus: TATc
Weblogo:
PSSM: P0 A C G T
01 0 0 0 96 T
02 96 0 0 0 A
03 4 4 4 84 T
04 19 38 20 19 c
Binding TFs: 4z59_A (Helix-turn-helix domain, Helix-turn-helix domain, Helix-turn-helix domain, Helix-turn-helix, Cro/C1-type HTH DNA-binding domain)
Binding Sites: 4z59_B

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