DNA Binding Motif

						

			
Accessions: JDP2_methyl_5 (HT-SELEX2 May2017)

			
Names: JDP2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 12
Consensus: srTGAyGTcAys
Weblogo: 
PSSM: P0      A      C      G      T
01    804   1108   1407    804      s
02   1892    599   2230    233      r
03     18    339     50   4122      T
04    139    309   4122   1166      G
05   4122    187    408    276      A
06     49   1905    293   2217      y
07    157    500   4122     92      G
08    507    246    129   4122      T
09   1538   4122    322    182      c
10   4122     33    401      7      A
11    308   1889    876   2233      y
12    783   1136   1332    872      s
Binding TFs: JDP2 (bZIP transcription factor, Basic region leucine zipper)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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