DNA Binding Motif

Accessions: 4ov7_EF (3D-footprint 20231221)
Names: Ancestral Steroid Receptor 2 DBD helix mutant
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Ancestral Steroid Receptor 2 DBD helix mutant - SRE DNA complex
Length: 14
Consensus: TnnnCAnnnTGTnC
Weblogo:
PSSM: P0 A C G T
01 8 8 8 72 T
02 24 24 24 24 n
03 24 24 24 24 n
04 24 24 24 24 n
05 0 96 0 0 C
06 96 0 0 0 A
07 24 24 24 24 n
08 24 24 24 24 n
09 24 24 24 24 n
10 11 8 8 69 T
11 0 0 96 0 G
12 8 8 11 69 T
13 24 24 24 24 n
14 0 87 0 9 C
Type: Heterodimer
Binding TFs: 4ov7_E (Zinc finger, C4 type (two domains))
4ov7_F (Zinc finger, C4 type (two domains))
Binding Sites: 4ov7_K
4ov7_L
Publications: McKeown A.N, Bridgham J.T, Anderson D.W, Murphy M.N, Ortlund E.A, Thornton J.W. Evolution of DNA specificity in a transcription factor family produced a new gene regulatory module. Cell 159:58-68 (2014). [Pubmed]

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.