DNA Binding Motif

Accessions: MA0925.1 (JASPAR 2024)
Names: sma-4
Organisms: Caenorhabditis elegans
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 11
Consensus: arTGTCTGGrc
Weblogo:
PSSM: P0 A C G T
01 331 223 223 223 a
02 273 228 300 199 r
03 33 33 33 901 T
04 0 0 917 83 G
05 83 0 0 917 T
06 0 1000 0 0 C
07 0 0 0 1000 T
08 215 0 785 0 G
09 27 27 836 110 G
10 360 242 256 142 r
11 217 349 217 217 c
Type: Heterodimer
Binding TFs: P45897 (MH1 domain, MH2 domain)
P45897
Publications: Massagué J, Seoane J, Wotton D. Smad transcription factors. Genes Dev 19:2783-810 (2005). [Pubmed]

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