DNA Binding Motif

						

			
Accessions: MA0258.2 (JASPAR 2024)

			
Names: ESR2
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 15
Consensus: rGGTCAsmstGaCCy
Weblogo: 
PSSM: P0      A      C      G      T
01   5410     96   2563    174      r
02    429      0   7170    644      G
03     59      0   8143     41      G
04     74    147    989   7033      T
05      0   7621    533     89      C
06   8098      1     57     87      A
07    502   4202   2738    801      s
08   2092   3235   1688   1228      m
09   1808   2510   2173   1752      s
10   1602    975    533   5133      t
11   1121    398   6658     66      G
12   3278   2056   1391   1518      a
13    434   6469    363    977      C
14   1111   5854      0   1278      C
15    834   2708    606   4095      y
Type: Heterodimer
Binding TFs: Q92731 (Ligand-binding domain of nuclear hormone receptor, Zinc finger, C4 type (two domains), Estrogen receptor beta)
Q92731
Binding Sites: MA0258.2.1
MA0258.2.10
MA0258.2.11
MA0258.2.12
MA0258.2.13
MA0258.2.14
MA0258.2.15
MA0258.2.16
MA0258.2.17
MA0258.2.18
MA0258.2.19
MA0258.2.2
MA0258.2.20
MA0258.2.3
MA0258.2.4
MA0258.2.5
MA0258.2.6
MA0258.2.7
MA0258.2.8
MA0258.2.9
			
Publications: Liu Y, Gao H, Marstrand T.T, Ström A, Valen E, Sandelin A, Gustafsson J.A, Dahlman-Wright K. The genome landscape of ERalpha- and ERbeta-binding DNA regions. Proceedings of the National Academy of Sciences of the United States of America 105:2604-9 (2008). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.