DNA Binding Motif

						

			
Accessions: ARF1 (Athamap 20091028)

			
Names: ARF1
Organisms: Arabidopsis thaliana
Libraries: Athamap 20091028 1
1 Bulow L, Engelmann S, Schindler M, Hehl R. AthaMap, integrating transcriptional and post-transcriptional data. Nucleic acids research 37:D983-6 (2009).  [Pubmed]
Length: 11
Consensus: CTTGTCTCCCA
Weblogo: 
PSSM: P0      A      C      G      T
01      0     10      0      0      C
02      1      0      0      9      T
03      0      0      0     10      T
04      0      0     10      0      G
05      0      0      0     10      T
06      0     10      0      0      C
07      1      1      1      7      T
08      1      9      0      0      C
09      1      9      0      0      C
10      1      9      0      0      C
11      8      1      1      0      A
Binding TFs: ARF1 (AUX/IAA family, B3 DNA binding domain, Auxin response factor)
			
Publications: Ulmasov T., Hagen G., Guilfoyle T. J. ARF1, a transcription factor that binds to auxin response elements. Science 276:1865-1868 (1997). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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