DNA Binding Motif
| Accessions: | 7gat_A (3D-footprint 20231221) |
| Names: | NITROGEN REGULATORY PROTEIN AREA |
| Organisms: | Emericella nidulans, Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Description: | SOLUTION NMR STRUCTURE OF THE L22V MUTANT DNA BINDING DOMAIN OF AREA COMPLEXED TO A 13 BP DNA CONTAINING A TGATA SITE, 34 STRUCTURES |
| Length: | 4 |
| Consensus: | TGat |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0 0 0 96 T 02 0 0 96 0 G 03 54 13 16 13 a 04 13 13 16 54 t |
| Binding TFs: | 7gat_A (GATA zinc finger) |
| Binding Sites: | 7gat_B 7gat_C |
| Publications: | Starich M.R, Wikström M, Schumacher S, Arst H.N, Gronenborn A.M, Clore G.M. The solution structure of the Leu22-->Val mutant AREA DNA binding domain complexed with a TGATAG core element defines a role for hydrophobic packing in the determination of specificity. Journal of molecular biology 277:621-34 (1998). [Pubmed] |
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