DNA Binding Motif

Accessions: MA0007.2 (JASPAR 2024)
Names: AR
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 15
Consensus: rrGaACAsavwGttc
Weblogo:
PSSM: P0 A C G T
01 6277 1112 3049 768 r
02 6497 0 4709 0 r
03 0 0 11206 0 G
04 6462 1304 1254 2186 a
05 11206 0 0 0 A
06 26 11115 65 0 C
07 10426 0 107 673 A
08 1478 2976 4023 2729 s
09 4353 2096 2151 2606 a
10 3312 3249 3291 1354 v
11 3241 142 305 7518 w
12 0 525 10681 0 G
13 2214 1262 671 7059 t
14 2656 2434 2460 3656 t
15 1599 7032 298 2277 c
Type: Heterodimer
Binding TFs: P10275 (Ligand-binding domain of nuclear hormone receptor, Zinc finger, C4 type (two domains), Androgen receptor)
P10275
Binding Sites: MA0007.2.1
MA0007.2.10
MA0007.2.11
MA0007.2.12
MA0007.2.13
MA0007.2.14
MA0007.2.15
MA0007.2.16
MA0007.2.17
MA0007.2.18
MA0007.2.19
MA0007.2.2
MA0007.2.20
MA0007.2.3
MA0007.2.4
MA0007.2.5
MA0007.2.6
MA0007.2.7
MA0007.2.8
MA0007.2.9
Publications: Hu S, Yao G, Guan X, Ni Z, Ma W, Wilson E.M, French F.S, Liu Q, Zhang Y. Research resource: Genome-wide mapping of in vivo androgen receptor binding sites in mouse epididymis. Molecular endocrinology (Baltimore, Md.) 24:2392-405 (2010). [Pubmed]

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.