DNA Binding Motif

Accessions: MA0165.1 (JASPAR 2018)
Names: Abd-B
Organisms: Drosophila melanogaster
Libraries: JASPAR 2018 1
1 [Pubmed]
Notes: bacterial 1-hybrid
Length: 7
Consensus: TTTATka
Weblogo:
PSSM: P0 A C G T
01 1 0 0 20 T
02 0 0 0 21 T
03 5 0 0 16 T
04 21 0 0 0 A
05 0 3 0 18 T
06 3 0 11 7 k
07 13 0 5 3 a
Binding TFs: P09087 (Homeobox domain)
Binding Sites: MA0165.1.1
MA0165.1.10
MA0165.1.11
MA0165.1.12
MA0165.1.13
MA0165.1.14
MA0165.1.15
MA0165.1.16
MA0165.1.17
MA0165.1.18 / MA0165.1.19
MA0165.1.2
MA0165.1.20
MA0165.1.3
MA0165.1.4
MA0165.1.5
MA0165.1.6
MA0165.1.7
MA0165.1.8
MA0165.1.9
Publications: Noyes M.B, Meng X, Wakabayashi A, Sinha S, Brodsky M.H, Wolfe S.A. A systematic characterization of factors that regulate Drosophila segmentation via a bacterial one-hybrid system. Nucleic acids research 36:2547-60 (2008). [Pubmed]

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