DNA Binding Motif

						

			
Accessions: M0637 (AthalianaCistrome v4_May2016)

			
Names: ANAC046.ampDAP, T13495;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 17
Consensus: CkTgttyyaCAMGywAy
Weblogo: 
PSSM: P0      A      C      G      T
01     14    571      8      7      C
02      4     15    181    400      k
03     20      4      6    570      T
04     88    114    372     26      g
05    112    105     36    347      t
06    146    143    129    182      t
07    142    203     91    164      y
08    143    205     68    184      y
09    380     25     90    105      a
10      1    484      6    109      C
11    600      0      0      0      A
12    184    416      0      0      M
13      0      0    595      5      G
14     42    184     50    324      y
15    235     98      7    260      w
16    529      0      2     69      A
17     98    261     58    183      y
Binding TFs: T13495 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.